ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6c2mD1 - ECOD Domain | ECOD

ECOD/Domains/e6c2mD1

e6c2mD1

UID: 002442454

PDB

Range: D:989-1179
PDB: 6C2M chain D(all domains)
UniProt: C1KIK8 (all domains)

Molecule: NS3 protease

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_S29 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S29(1.1.5.14)

Ligands

in contact, ≤ 4 Å

GrazoprevirSUE
drugDrugBank DB11575
Zinc ionZN
metal

Shown in the structure viewer.

Pfam Families

PF02907Peptidase_S29

Hepatitis C virus NS3 protease

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6C2M RCSB PDB: 6C2M PDBe: 6C2M UniProt: C1KIK8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.