ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fgdA4 - ECOD Domain | ECOD

ECOD/Domains/e6fgdA4

e6fgdA4

UID: 002442573

PDB

Range: A:654-736
PDB: 6FGD chain A(all domains)
UniProt: Q03555 (all domains)
Gene: Gphn

Molecule: Gephyrin

3D Structure

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Related Domains

Browse other domains in MoeA_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupMoeA C-terminal domain-like(70.1)

TT-groupMoeA C-terminal domain-like(70.1.1)

FFamilyMoeA_C(70.1.1.1)

Ligands

in contact, ≤ 4 Å

ArtemetherD8Z
drugDrugBank DB06697

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Acetate ion)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Pfam Families

MoeA C-terminal region (domain IV)

External Links

ECOD PDB View: 6FGD RCSB PDB: 6FGD PDBe: 6FGD UniProt: Q03555

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.