ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6h40A1 - ECOD Domain | ECOD

ECOD/Domains/e6h40A1

e6h40A1

UID: 002442627

PDB

Range: A:2-221
PDB: 6H40 chain A(all domains)
UniProt: K5B7F3 (all domains)
Gene: meT1

Molecule: Methyltransferase domain protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_24 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_24(2003.1.5.80)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Chloride ionCL
(2~{S})-3-methoxypropane-1,2-diolFW5

Pfam Families

PF13578Methyltransf_24

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6H40 RCSB PDB: 6H40 PDBe: 6H40 UniProt: K5B7F3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.