ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cpmD1 - ECOD Domain | ECOD

ECOD/Domains/e6cpmD1

e6cpmD1

UID: 002442982

PDB

Range: D:280-618
PDB: 6CPM chain D(all domains)
UniProt: Q9Y4E8 (all domains)
Gene: USP15

Molecule: Ubiquitin carboxyl-terminal hydrolase 15

3D Structure

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Related Domains

Browse other domains in UCH →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal
Zinc ionZN

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6CPM RCSB PDB: 6CPM PDBe: 6CPM UniProt: Q9Y4E8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.