ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i1lD4 - ECOD Domain | ECOD

ECOD/Domains/e6i1lD4

e6i1lD4

UID: 002443138

PDB

Range: D:47-338
PDB: 6I1L chain D(all domains)
UniProt: A0Q7Q2 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a

3D Structure

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Related Domains

Browse other domains in REC1 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease first helical domain(1070)

HH-groupCRISPR-associated endonuclease Cpf1 first helical domain(1070.1)

TT-groupCRISPR-associated endonuclease Cpf1 first helical domain(1070.1.1)

FFamilyREC1(1070.1.1.1)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Alpha helical recognition lobe domain

External Links

ECOD PDB View: 6I1L RCSB PDB: 6I1L PDBe: 6I1L UniProt: A0Q7Q2

Downloads

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