ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ndeF1 - ECOD Domain | ECOD

ECOD/Domains/e6ndeF1

e6ndeF1

UID: 002443500

PDB

Range: F:172-362
PDB: 6NDE chain F(all domains)
UniProt: P17301 (all domains)
Gene: ITGA2

Molecule: Integrin alpha-2

3D Structure

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Related Domains

Browse other domains in VWA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupvWA-like(2006.1.6)

FFamilyVWA(2006.1.6.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Praseodymium ionPR
metal
Chloride ionCL

Pfam Families

von Willebrand factor type A domain

ClanCL0128vWA-like

External Links

ECOD PDB View: 6NDE RCSB PDB: 6NDE PDBe: 6NDE UniProt: P17301

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.