ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6csfM1 - ECOD Domain | ECOD

ECOD/Domains/e6csfM1

e6csfM1

UID: 002444945

PDB

Range: M:15-451
PDB: 6CSF chain M(all domains)
UniProt: Q6LX42 (all domains)
Gene: agcS

Molecule: Sodium/alanine symporter AgcS

3D Structure

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Related Domains

Browse other domains in Na_Ala_symp →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilyNa_Ala_symp(5051.1.1.5)

Ligands

in contact, ≤ 4 Å

D-AlanineDAL
drugDrugBank DB01786
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01235Na_Ala_symp

Sodium:alanine symporter family

ClanCL0062APC

External Links

ECOD PDB View: 6CSF RCSB PDB: 6CSF PDBe: 6CSF UniProt: Q6LX42

Downloads

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