ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6f9hA1 - ECOD Domain | ECOD

ECOD/Domains/e6f9hA1

e6f9hA1

UID: 002445198

PDB

Range: A:5-489
PDB: 6F9H chain A(all domains)
UniProt: A8CFR3 (all domains)
Gene: Bmy1

Molecule: Beta-amylase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_14 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_14(2002.1.1.64)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
alpha-D-glucopyranoseGLC
1,4-dideoxy-4-thio-nojirimycinSGJ

Shown in the structure viewer.

Pfam Families

PF01373Glyco_hydro_14

Glycosyl hydrolase family 14

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6F9H RCSB PDB: 6F9H PDBe: 6F9H UniProt: A8CFR3

Downloads

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Drug annotations from DrugDomain.