ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fcbA1 - ECOD Domain | ECOD

ECOD/Domains/e6fcbA1

e6fcbA1

UID: 002445261

PDB

Range: A:126-251
PDB: 6FCB chain A(all domains)
UniProt: P31153 (all domains)
Gene: MAT2A

Molecule: S-adenosylmethionine synthase isoform type-2

3D Structure

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Related Domains

Browse other domains in S-AdoMet_synt_M →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupS-adenosylmethionine synthetase(327.17)

TT-groupS-adenosylmethionine synthetase(327.17.1)

FFamilyS-AdoMet_synt_M(327.17.1.3)

Ligands

in contact, ≤ 4 Å

(Diphosphono)Aminophosphonic AcidPPK
drugDrugBank DB03075
AdemetionineSAM
drugDrugBank DB00118

Pfam Families

PF02772S-AdoMet_synt_M

S-adenosylmethionine synthetase, central domain

External Links

ECOD PDB View: 6FCB RCSB PDB: 6FCB PDBe: 6FCB UniProt: P31153

Downloads

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Magnesium ion

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.