ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hwaK1 - ECOD Domain | ECOD

ECOD/Domains/e6hwaK1

e6hwaK1

UID: 002446501

PDB

Range: K:1-212
PDB: 6HWA chain K(all domains)
UniProt: P30656 (all domains)
Gene: PRE2

Molecule: Proteasome subunit beta type-5

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{S})-~{N}-[(2~{S},3~{R})-1-[(4~{a}~{S},8~{a}~{S})-1,2,3,4,4~{a},5,6,7,8,8~{a}-decahydronaphthalen-2-yl]-4-methyl-3,4-bis(oxidanyl)pentan-2-yl]-3-(4-methoxyphenyl)-2-[[(2~{S})-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]propanamideGVW
Magnesium ionMG
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 6HWA RCSB PDB: 6HWA PDBe: 6HWA UniProt: P30656

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.