ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ih0A2 - ECOD Domain | ECOD

ECOD/Domains/e6ih0A2

e6ih0A2

UID: 002446702

PDB

Range: A:2-121
PDB: 6IH0 chain A(all domains)
UniProt: O67648 (all domains)
Gene: lpxC

Molecule: UDP-3-O-acyl-N-acetylglucosamine deacetylase

3D Structure

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Related Domains

Browse other domains in LpxC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyLpxC(212.1.1.15)

Ligands

in contact, ≤ 4 Å

N-[(2S)-3-azanyl-3-methyl-1-(oxidanylamino)-1-oxidanylidene-butan-2-yl]-4-[4-[(1R,2R)-2-(hydroxymethyl)cyclopropyl]buta-1,3-diynyl]benzamideA5F
methyl (2S)-2-azanyl-3-methyl-3-[(2-methylpropan-2-yl)oxycarbonylamino]butanoateA5U
Zinc ionZN

Pfam Families

UDP-3-O-acyl N-acetylglycosamine deacetylase

ClanCL0329S5

External Links

ECOD PDB View: 6IH0 RCSB PDB: 6IH0 PDBe: 6IH0 UniProt: O67648

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.