ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yz8B1 - ECOD Domain | ECOD

ECOD/Domains/e5yz8B1

e5yz8B1

UID: 002447166

PDB

Range: B:17-249
PDB: 5YZ8 chain B(all domains)
UniProt: Q79PF4 (all domains)
Gene: kaiC

Molecule: Circadian Clock Protein Kinase KaiC

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyATPase(2004.1.1.146)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
Chloride ionCL
Magnesium ionMG

Pfam Families

KaiC

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5YZ8 RCSB PDB: 5YZ8 PDBe: 5YZ8 UniProt: Q79PF4

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.