ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cbtB1 - ECOD Domain | ECOD

ECOD/Domains/e6cbtB1

e6cbtB1

UID: 002447480

PDB

Range: B:445-581,B:595-599
PDB: 6CBT chain B(all domains)
UniProt: P0ABS5 (all domains)
Gene: dnaG

Molecule: DNA primase, single-stranded DNA-binding protein chimera

3D Structure

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Related Domains

Browse other domains in DnaG_DnaB_bind →

Classification

AArchitecturealpha arrays(a.6)

XX-groupDnaB helicase N-terminal domain-related(507)

HH-groupDnaB helicase N-terminal domain-related(507.1)

TT-groupDnaB helicase N-terminal domain-related(507.1.1)

FFamilyDnaG_DnaB_bind(507.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Acetic acid)

Acetic acidACY
DrugBank DB03166

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08278DnaG_DnaB_bind

DNA primase DnaG DnaB-binding

ClanCL0929DNA_primase_C

External Links

ECOD PDB View: 6CBT RCSB PDB: 6CBT PDBe: 6CBT UniProt: P0ABS5

Downloads

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