ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6igzJ1 - ECOD Domain | ECOD

ECOD/Domains/e6igzJ1

e6igzJ1

UID: 002448299

PDB

Range: J:1-41
PDB: 6IGZ chain J(all domains)
UniProt: A0A4V8GZZ3 (all domains)

Molecule: PsaJ

3D Structure

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Related Domains

Browse other domains in PSI_PsaJ →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit IX of photosystem I reaction centre, PsaJ(5021)

HH-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1)

TT-groupSubunit IX of photosystem I reaction centre, PsaJ(5021.1.1)

FFamilyPSI_PsaJ(5021.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
Heptyl 1-ThiohexopyranosideHTG
drugDrugBank DB04450

Pfam Families

PF01701PSI_PsaJ

Photosystem I reaction centre subunit IX / PsaJ

External Links

ECOD PDB View: 6IGZ RCSB PDB: 6IGZ PDBe: 6IGZ UniProt: A0A4V8GZZ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phylloquinone

drugDrugBank DB01022within 5 Å only

(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene8CT

Shown in the structure viewer. Drug annotations from DrugDomain.