ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2c5cF1 - ECOD Domain | ECOD

ECOD/Domains/e2c5cF1

e2c5cF1

UID: 000024500

PDB

Range: F:1-69
PDB: 2C5C chain F(all domains)
UniProt: P69178 (all domains)
Gene: stxB

Molecule: SHIGA-LIKE TOXIN 1 B SUBUNIT

3D Structure

Loading viewer...

Related Domains

Browse other domains in SLT_beta →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilySLT_beta(2.2.1.3)

Ligands

in contact, ≤ 4 Å

DIETHYL PROPANE-1,3-DIYLBISCARBAMATES10
drugDrugBank DB08501within 5 Å only
alpha-D-galactopyranoseGLA
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02258SLT_beta

Shiga-like toxin beta subunit

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 2C5C RCSB PDB: 2C5C PDBe: 2C5C UniProt: P69178

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure