ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ga4F1 - ECOD Domain | ECOD

ECOD/Domains/e2ga4F1

e2ga4F1

UID: 000024501

PDB

Range: F:1-68
PDB: 2GA4 chain F(all domains)
UniProt: P09386 (all domains)
Gene: stxB2

Molecule: Shiga-like toxin II subunit B

3D Structure

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Related Domains

Browse other domains in SLT_beta →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilySLT_beta(2.2.1.3)

Ligands

in contact, ≤ 4 Å

3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE1PS
Sodium ionNA
metal

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT

Pfam Families

PF02258SLT_beta

Shiga-like toxin beta subunit

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 2GA4 RCSB PDB: 2GA4 PDBe: 2GA4 UniProt: P09386

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01942

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.