ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a8gB1 - ECOD Domain | ECOD

ECOD/Domains/e6a8gB1

e6a8gB1

UID: 002451846

PDB

Range: B:16-243
PDB: 6A8G chain B(all domains)
UniProt: P06869 (all domains)
Gene: Plau

Molecule: Urokinase-type plasminogen activator chain B

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6A8G RCSB PDB: 6A8G PDBe: 6A8G UniProt: P06869

Downloads

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