ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ncwC1 - ECOD Domain | ECOD

ECOD/Domains/e6ncwC1

e6ncwC1

UID: 002452309

PDB

Range: C:250-559
PDB: 6NCW chain C(all domains)
UniProt: A0A1E3AEY6 (all domains)
Gene: uidA_6

Molecule: Beta-galacturonidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6NCW RCSB PDB: 6NCW PDBe: 6NCW UniProt: A0A1E3AEY6

Downloads

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