ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6j8eA3 - ECOD Domain | ECOD

ECOD/Domains/e6j8eA3

e6j8eA3

UID: 002452532

PDB

Range: A:1483-1785
PDB: 6J8E chain A(all domains)
UniProt: Q99250 (all domains)
Gene: SCN2A

Molecule: Sodium channel protein type 2 subunit alpha

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

(3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en9Z9

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6J8E RCSB PDB: 6J8E PDBe: 6J8E UniProt: Q99250

Downloads

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