ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ze6B1 - ECOD Domain | ECOD

ECOD/Domains/e5ze6B1

e5ze6B1

UID: 002452997

PDB

Range: B:1-321
PDB: 5ZE6 chain B(all domains)
UniProt: P0AD57 (all domains)
Gene: ispB

Molecule: Octaprenyl diphosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

2-hydroxy-6-(tetradecyloxy)benzoic acidHJX
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 5ZE6 RCSB PDB: 5ZE6 PDBe: 5ZE6 UniProt: P0AD57

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure