ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gpuA1 - ECOD Domain | ECOD

ECOD/Domains/e6gpuA1

e6gpuA1

UID: 002453111

PDB

Range: A:1-115
PDB: 6GPU chain A(all domains)
UniProt: P93025 (all domains)
Gene: PHOT2

Molecule: Phototropin-2

3D Structure

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Related Domains

Browse other domains in PAS_9 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_9(223.1.1.25)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Chloride ionCL
COBALT (II) IONCO

Pfam Families

PAS domain

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 6GPU RCSB PDB: 6GPU PDBe: 6GPU UniProt: P93025

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Magnesium ionMG

metalwithin 5 Å only

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.