ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m9fB1 - ECOD Domain | ECOD

ECOD/Domains/e5m9fB1

e5m9fB1

UID: 002453762

PDB

Range: B:337-458
PDB: 5M9F chain B(all domains)
UniProt: Q6Y7P9 (all domains)
Gene: PhageK_122

Molecule: ORF68

3D Structure

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Related Domains

Browse other domains in ORF68_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupgp9 C-terminal domain-like(3386)

HH-groupgp9 C-terminal domain-related(3386.1)

TT-groupgp9 C-terminal domain-related(3386.1.1)

FFamilyORF68_C(3386.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23624ORF68_C

ORF68-like, C-terminal domain

ClanCL0840H_lectin

External Links

ECOD PDB View: 5M9F RCSB PDB: 5M9F PDBe: 5M9F UniProt: Q6Y7P9

Downloads

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