ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hogA1 - ECOD Domain | ECOD

ECOD/Domains/e6hogA1

e6hogA1

UID: 002454424

PDB

Range: A:-13--5,A:-1-112
PDB: 6HOG chain A(all domains)
UniProt: O95166 (all domains)
Gene: GABARAP

Molecule: Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein

3D Structure

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Related Domains

Browse other domains in ATG8 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyATG8(221.1.1.18)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

Autophagy protein Atg8 ubiquitin like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6HOG RCSB PDB: 6HOG PDBe: 6HOG UniProt: O95166

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.