ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mboB2 - ECOD Domain | ECOD

ECOD/Domains/e6mboB2

e6mboB2

UID: 002454585

PDB

Range: B:976-1026,B:1093-1235
PDB: 6MBO chain B(all domains)
UniProt: Q9H9B1 (all domains)
Gene: EHMT1

Molecule: Histone-lysine N-methyltransferase EHMT1

3D Structure

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Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
2-cyclohexyl-7-methoxy-N-[1-(propan-2-yl)piperidin-4-yl]-8-[3-(pyrrolidin-1-yl)propoxy]-3H-1,4-benzodiazepin-5-amineJDG
Zinc ion

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 6MBO RCSB PDB: 6MBO PDBe: 6MBO UniProt: Q9H9B1

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.