ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mdtG3 - ECOD Domain | ECOD

ECOD/Domains/e6mdtG3

e6mdtG3

UID: 002454592

PDB

Range: G:120-202
PDB: 6MDT chain G(all domains)
UniProt: B3UF58 (all domains)
Gene: env

Molecule: Surface protein gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupV1/V2 domain in HIV gp120(6173)

HH-groupV1/V2 domain in HIV gp120(6173.1)

TT-groupV1/V2 domain in HIV gp120(6173.1.1)

FFamilyGP120(6173.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 6MDT RCSB PDB: 6MDT PDBe: 6MDT UniProt: B3UF58

Downloads

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