ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zm6B1 - ECOD Domain | ECOD

ECOD/Domains/e5zm6B1

e5zm6B1

UID: 002454813

PDB

Range: B:531-789,B:823-950
PDB: 5ZM6 chain B(all domains)
UniProt: Q9BXW6 (all domains)
Gene: OSBPL1A

Molecule: Oxysterol-binding protein-related protein 1

3D Structure

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Related Domains

Browse other domains in Oxysterol_BP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOxysterol-binding protein(4291)

HH-groupOxysterol-binding protein(4291.1)

TT-groupOxysterol-binding protein(4291.1.1)

FFamilyOxysterol_BP(4291.1.1.1)

Ligands

in contact, ≤ 4 Å

[(2~{S})-1-octadecanoyloxy-3-[oxidanyl-[(1~{R},2~{R},3~{S},4~{S},5~{S},6~{S})-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] icosa-5,8,11,14-tetraenoateIEP

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Pfam Families

PF01237Oxysterol_BP

Oxysterol-binding protein

External Links

ECOD PDB View: 5ZM6 RCSB PDB: 5ZM6 PDBe: 5ZM6 UniProt: Q9BXW6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.