ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n9wH1 - ECOD Domain | ECOD

ECOD/Domains/e6n9wH1

e6n9wH1

UID: 002455468

PDB

Range: H:463-490,H:614-704
PDB: 6N9W chain H(all domains)
UniProt: P00581 (all domains)
Gene: 5

Molecule: DNA-directed DNA polymerase

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_A(304.48.1.6)

Ligands

in contact, ≤ 4 Å

Thymidine 5'-triphosphateTTP
drugDrugBank DB02452
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 6N9W RCSB PDB: 6N9W PDBe: 6N9W UniProt: P00581

Downloads

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