ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6m96A1 - ECOD Domain | ECOD

ECOD/Domains/e6m96A1

e6m96A1

UID: 002455676

PDB

Range: A:0-237
PDB: 6M96 chain A(all domains)
UniProt: O67181 (all domains)
Gene: abcT4

Molecule: ABC transporter

3D Structure

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Related Domains

Browse other domains in ABC_tran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran(2004.1.1.5)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
PhosphatidylethanolaminePEE
drugDrugBank DB04327

+ 3 additives (Glycerin, Dodecyldimethylamine N-oxide, Tetraethylene glycol)

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6M96 RCSB PDB: 6M96 PDBe: 6M96 UniProt: O67181

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Dodecyldimethylamine N-oxideLDA
DrugBank DB04147
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.