ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6npcB1 - ECOD Domain | ECOD

ECOD/Domains/e6npcB1

e6npcB1

UID: 002455710

PDB

Range: B:-2-102
PDB: 6NPC chain B(all domains)
UniProt: A0A4V8H042 (all domains)
Gene: tmpA

Molecule: TmpA, 2-trimethylaminoethylphosphonate hydroxylase

3D Structure

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Related Domains

Browse other domains in GBBH-like_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupXRCC4, N-terminal domain-like(719)

HH-groupNE0471 N-terminal domain-like(719.2)

TT-groupNE0471 N-terminal domain-like(719.2.1)

FFamilyGBBH-like_N(719.2.1.1)

Ligands

in contact, ≤ 4 Å

N,N,N-trimethyl-2-phosphonoethan-1-aminiumKVV
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06155GBBH-like_N

Gamma-butyrobetaine hydroxylase-like, N-terminal

External Links

ECOD PDB View: 6NPC RCSB PDB: 6NPC PDBe: 6NPC UniProt: A0A4V8H042

Downloads

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