ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6nueI2 - ECOD Domain | ECOD

ECOD/Domains/e6nueI2

e6nueI2

UID: 002458076

PDB

Range: I:3-206
PDB: 6NUE chain I(all domains)
UniProt: A0A0A7HGA1 (all domains)
Gene: csm4

Molecule: CRISPR type III-associated RAMP protein Csm4

3D Structure

Loading viewer...

Related Domains

Browse other domains in RAMPs →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyRAMPs(304.51.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 6NUE RCSB PDB: 6NUE PDBe: 6NUE UniProt: A0A0A7HGA1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure