ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1bioA1 - ECOD Domain | ECOD

ECOD/Domains/e1bioA1

e1bioA1

UID: 000000246

RepresentativePDB

Range: A:16-243
PDB: 1BIO chain A(all domains)
UniProt: P00746 (all domains)
Gene: CFD

Molecule: COMPLEMENT FACTOR D

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

2-Aminobenzyl alcoholSOA
drugDrugBank DB03058

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1BIO RCSB PDB: 1BIO PDBe: 1BIO UniProt: P00746

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.