ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zheB1 - ECOD Domain | ECOD

ECOD/Domains/e5zheB1

e5zheB1

UID: 002460143

PDB

Range: B:17-71,B:91-238
PDB: 5ZHE chain B(all domains)
UniProt: P60472 (all domains)
Gene: ispU

Molecule: Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

2-hydroxy-6-(tetradecyloxy)benzoic acidHJX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 5ZHE RCSB PDB: 5ZHE PDBe: 5ZHE UniProt: P60472

Downloads

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