ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2c4cB1 - ECOD Domain | ECOD

ECOD/Domains/e2c4cB1

e2c4cB1

UID: 002462525

PDB

Range: B:7-238,B:366-487
PDB: 2C4C chain B(all domains)
UniProt: Q8VDP3 (all domains)
Gene: Mical1

Molecule: NEDD9-INTERACTING PROTEIN WITH CALPONIN HOMOLOGY AND LIM DOMAINS

3D Structure

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Related Domains

Browse other domains in FAD_binding_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_3(2003.1.2.15)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01494FAD_binding_3

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2C4C RCSB PDB: 2C4C PDBe: 2C4C UniProt: Q8VDP3

Downloads

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