ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mgbA1 - ECOD Domain | ECOD

ECOD/Domains/e6mgbA1

e6mgbA1

UID: 002464320

PDB

Range: A:-5-315
PDB: 6MGB chain A(all domains)
UniProt: A0A179D1D1 (all domains)
Gene: TDIS_2046

Molecule: Capsular polysaccharide export system protein KpsC

3D Structure

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Related Domains

Browse other domains in Capsule_synth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyCapsule_synth(7512.1.1.16)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-MonophosphateC5P
drugDrugBank DB03403
Chloride ionCL
Magnesium ionMG

Pfam Families

PF05159Capsule_synth

Capsule polysaccharide biosynthesis protein

ClanCL0113GT-B

External Links

ECOD PDB View: 6MGB RCSB PDB: 6MGB PDBe: 6MGB UniProt: A0A179D1D1

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.