ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mjpG1 - ECOD Domain | ECOD

ECOD/Domains/e6mjpG1

e6mjpG1

UID: 002464331

PDB

Range: G:1-142,G:241-356
PDB: 6MJP chain G(all domains)
UniProt: Q9KP76 (all domains)
Gene: VC_2499

Molecule: LPS export ABC transporter permease LptG

3D Structure

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Related Domains

Browse other domains in LptF_LptG →

Classification

AArchitecturealpha bundles(a.7)

XX-groupType II ABC exporter transmembrane domain fold(1075)

HH-groupType II ABC exporter transmembrane domain-related(1075.1)

TT-groupABCG5/ABCG8 transmembrane domain(1075.1.1)

FFamilyLptF_LptG(1075.1.1.2)

Ligands

in contact, ≤ 4 Å

Cyclohexyl-Hexyl-Beta-D-MaltosideMA4
drugDrugBank DB03472
6-cyclohexylhexyl beta-D-glucopyranosideJU7
within 5 Å only

+ 3 additives (Glycerin, Dodecyl-beta-d-maltoside, Tetraethylene glycol)

Pfam Families

PF03739LptF_LptG

Lipopolysaccharide export system permease LptF/LptG

ClanCL0404BPD_transp_1

External Links

ECOD PDB View: 6MJP RCSB PDB: 6MJP PDBe: 6MJP UniProt: Q9KP76

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Dodecyl-beta-d-maltosideLMT
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.