ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mitE1 - ECOD Domain | ECOD

ECOD/Domains/e6mitE1

e6mitE1

UID: 002465541

PDB

Range: E:2-239
PDB: 6MIT chain E(all domains)
UniProt: A0A0H3CR83 (all domains)
Gene: ECL_04583

Molecule: Lipopolysaccharide export system ATP-binding protein

3D Structure

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Related Domains

Browse other domains in ABC_tran,BCA_ABC_TP_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran,BCA_ABC_TP_C(2004.1.1.7)

Ligands

in contact, ≤ 4 Å

NovobiocinNOV
drugDrugBank DB01051

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

PF12399BCA_ABC_TP_C

Branched-chain amino acid ATP-binding cassette transporter

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6MIT RCSB PDB: 6MIT PDBe: 6MIT UniProt: A0A0H3CR83

Downloads

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Drug annotations from DrugDomain.