ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q56D2 - ECOD Domain | ECOD

ECOD/Domains/e6q56D2

e6q56D2

UID: 002465608

PDB

Range: D:3-166
PDB: 6Q56 chain D(all domains)
UniProt: P54471 (all domains)
Gene: trmK

Molecule: tRNA (adenine(22)-N(1))-methyltransferase

3D Structure

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Related Domains

Browse other domains in TrmK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyTrmK(2003.1.5.40)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

tRNA (adenine(22)-N(1))-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6Q56 RCSB PDB: 6Q56 PDBe: 6Q56 UniProt: P54471

Downloads

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