ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5qgrA1 - ECOD Domain | ECOD

ECOD/Domains/e5qgrA1

e5qgrA1

UID: 002465647

PDB

Range: A:15-210
PDB: 5QGR chain A(all domains)
UniProt: P0C024 (all domains)
Gene: NUDT7

Molecule: Peroxisomal coenzyme A diphosphatase NUDT7

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

5-(pyridin-2-yl)thiophene-2-carbothioamideH0J

+ 2 additives (Acetate, Dimethyl sulfoxide)

AcetateACT
DrugBank DB14511
Dimethyl sulfoxideDMS

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5QGR RCSB PDB: 5QGR PDBe: 5QGR UniProt: P0C024

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.