ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zlfA1 - ECOD Domain | ECOD

ECOD/Domains/e5zlfA1

e5zlfA1

UID: 002465744

PDB

Range: A:2-319
PDB: 5ZLF chain A(all domains)
UniProt: P0AD57 (all domains)
Gene: ispB

Molecule: Octaprenyl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

[2-(3-DIBENZOFURAN-4-YL-PHENYL)-1-HYDROXY-1-PHOSPHONO-ETHYL]-PHOSPHONIC ACIDB29
drugDrugBank DB07410
Magnesium ionMG
metal

Shown in the structure viewer.

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 5ZLF RCSB PDB: 5ZLF PDBe: 5ZLF UniProt: P0AD57

Downloads

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Drug annotations from DrugDomain.