ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mhzB1 - ECOD Domain | ECOD

ECOD/Domains/e6mhzB1

e6mhzB1

UID: 002466091

PDB

Range: B:2-236
PDB: 6MHZ chain B(all domains)
UniProt: P0A9V1 (all domains)
Gene: lptB

Molecule: Lipopolysaccharide export system ATP-binding protein LptB

3D Structure

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Related Domains

Browse other domains in ABC_tran,BCA_ABC_TP_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran,BCA_ABC_TP_C(2004.1.1.7)

Ligands

in contact, ≤ 4 Å

Adp orthovanadateAOV

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

PF12399BCA_ABC_TP_C

Branched-chain amino acid ATP-binding cassette transporter

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6MHZ RCSB PDB: 6MHZ PDBe: 6MHZ UniProt: P0A9V1

Downloads

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