ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dflA1 - ECOD Domain | ECOD

ECOD/Domains/e6dflA1

e6dflA1

UID: 002466669

PDB

Range: A:1-259
PDB: 6DFL chain A(all domains)
UniProt: Q9HUF7 (all domains)
Gene: waaP

Molecule: Lipopolysaccharide core heptose(I) kinase RfaP

3D Structure

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Related Domains

Browse other domains in Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyKdo(206.1.1.17)

Ligands

in contact, ≤ 4 Å

S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] hexadecanethioateG9S

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 6DFL RCSB PDB: 6DFL PDBe: 6DFL UniProt: Q9HUF7

Downloads

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