ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n9rX1 - ECOD Domain | ECOD

ECOD/Domains/e6n9rX1

e6n9rX1

UID: 002468147

PDB

Range: X:8-150,X:170-283
PDB: 6N9R chain X(all domains)
UniProt: A0A023DFE8 (all domains)
Gene: GCA01S_030_00190

Molecule: Putative hydrolase

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONEOHN
drugDrugBank DB08324
COBALT (II) IONCO
metal
FE (III) ION

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 6N9R RCSB PDB: 6N9R PDBe: 6N9R UniProt: A0A023DFE8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 4 additives (Acetate, Sulfate ion, Pentaethylene glycol, …)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
Pentaethylene glycol1PE
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.