ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cxyC1 - ECOD Domain | ECOD

ECOD/Domains/e6cxyC1

e6cxyC1

UID: 002469658

PDB

Range: C:102-213
PDB: 6CXY chain C(all domains)
UniProt: P12830 (all domains)
Gene: CDH1

Molecule: Cadherin-1

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 6CXY RCSB PDB: 6CXY PDBe: 6CXY UniProt: P12830

Downloads

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