ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6d07A1 - ECOD Domain | ECOD

ECOD/Domains/e6d07A1

e6d07A1

UID: 002469724

PDB

Range: A:1-54
PDB: 6D07 chain A(all domains)
UniProt: P83916 (all domains)
Gene: CBX1

Molecule: Chromobox protein homolog 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Chromo →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyChromo(4.8.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Chromo (CHRromatin Organisation MOdifier) domain

ClanCL0010SH3

External Links

ECOD PDB View: 6D07 RCSB PDB: 6D07 PDBe: 6D07 UniProt: P83916

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure