ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i2vA1 - ECOD Domain | ECOD

ECOD/Domains/e6i2vA1

e6i2vA1

UID: 002469837

PDB

Range: A:5-114
PDB: 6I2V chain A(all domains)
UniProt: A0A1V8MYF4 (all domains)
Gene: AL548_019455

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in T2SSS_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupputative secreted protein PA3611(3148)

HH-groupputative secreted protein PA3611(3148.1)

TT-groupputative secreted protein PA3611(3148.1.1)

FFamilyT2SSS_2(3148.1.1.2)

Ligands

in contact, ≤ 4 Å

Sulfite ionSO3

+ 3 additives (Sulfate ion, Pentaethylene glycol, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
Pentaethylene glycol1PE

Pfam Families

PF16549T2SSS_2

Type II secretion system (T2SS) pilotin, S protein

ClanCL0940AspS-like

External Links

ECOD PDB View: 6I2V RCSB PDB: 6I2V PDBe: 6I2V UniProt: A0A1V8MYF4

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.