ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6afyB1 - ECOD Domain | ECOD

ECOD/Domains/e6afyB1

e6afyB1

UID: 002470434

PDB

Range: B:2-41,B:67-766
PDB: 6AFY chain B(all domains)
UniProt: P21616 (all domains)

Molecule: Pyrophosphate-energized vacuolar membrane proton pump

3D Structure

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Related Domains

Browse other domains in H_PPase →

Classification

AArchitecturealpha bundles(a.7)

XX-groupNa/H pumping membrane integral pyrophosphatase(3565)

HH-groupNa/H pumping membrane integral pyrophosphatase(3565.1)

TT-groupNa/H pumping membrane integral pyrophosphatase(3565.1.1)

FFamilyH_PPase(3565.1.1.1)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol1PG
drugDrugBank DB02042
Potassium ionK
metal
Magnesium ion

Pfam Families

PF03030H_PPase

Inorganic H+ pyrophosphatase

External Links

ECOD PDB View: 6AFY RCSB PDB: 6AFY PDBe: 6AFY UniProt: P21616

Downloads

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metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.