ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6g40B2 - ECOD Domain | ECOD

ECOD/Domains/e6g40B2

e6g40B2

UID: 002470683

PDB

Range: B:10-135
PDB: 6G40 chain B(all domains)
UniProt: O08760 (all domains)
Gene: Ogg1

Molecule: N-glycosylase/DNA lyase

3D Structure

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Related Domains

Browse other domains in OGG_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupTATA-box binding protein-like(331.1)

TT-groupTATA-box binding protein-like(331.1.1)

FFamilyOGG_N(331.1.1.5)

Ligands

in contact, ≤ 4 Å

~{N}-(3-methoxy-4-methyl-phenyl)-4-(4-methoxy-2-oxidanylidene-3~{H}-benzimidazol-1-yl)piperidine-1-carboxamideELK

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

8-oxoguanine DNA glycosylase, N-terminal domain

ClanCL0407TBP-like

External Links

ECOD PDB View: 6G40 RCSB PDB: 6G40 PDBe: 6G40 UniProt: O08760

Downloads

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