ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h3dA1 - ECOD Domain | ECOD

ECOD/Domains/e6h3dA1

e6h3dA1

UID: 002470747

PDB

Range: A:2-199
PDB: 6H3D chain A(all domains)
UniProt: A0A0H3JT80 (all domains)
Gene: cntM

Molecule: DUF2338 domain-containing protein

3D Structure

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Related Domains

Browse other domains in Staph_opine_DH →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyStaph_opine_DH(2003.1.1.64)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10100Staph_opine_DH

Staphylopine dehydrogenase

External Links

ECOD PDB View: 6H3D RCSB PDB: 6H3D PDBe: 6H3D UniProt: A0A0H3JT80

Downloads

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