ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qxgB1 - ECOD Domain | ECOD

ECOD/Domains/e6qxgB1

e6qxgB1

UID: 002471065

PDB

Range: B:26-310
PDB: 6QXG chain B(all domains)
UniProt: P04818 (all domains)
Gene: TYMS

Molecule: Thymidylate synthase

3D Structure

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Related Domains

Browse other domains in Thymidylat_synt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThymidylate synthase/dCMP hydroxymethylase(266)

HH-groupThymidylate synthase/dCMP hydroxymethylase(266.1)

TT-groupThymidylate synthase/dCMP hydroxymethylase(266.1.1)

FFamilyThymidylat_synt(266.1.1.1)

Ligands

in contact, ≤ 4 Å

5-fluoro-2'-deoxyuridine-5'-monophosphateUFP
drugDrugBank DB03761

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00303Thymidylat_synt

Thymidylate synthase

External Links

ECOD PDB View: 6QXG RCSB PDB: 6QXG PDBe: 6QXG UniProt: P04818

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.