ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mnzA1 - ECOD Domain | ECOD

ECOD/Domains/e6mnzA1

e6mnzA1

UID: 002472991

PDB

Range: A:205-368
PDB: 6MNZ chain A(all domains)
UniProt: V5V8R9 (all domains)
Gene: ribB

Molecule: 3,4-dihydroxy-2-butanone 4-phosphate synthase

3D Structure

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Related Domains

Browse other domains in GTP_cyclohydro2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibA-like(7580)

HH-groupRibA-like(7580.1)

TT-groupRibA-like(7580.1.1)

FFamilyGTP_cyclohydro2(7580.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

PF00925GTP_cyclohydro2

GTP cyclohydrolase II

External Links

ECOD PDB View: 6MNZ RCSB PDB: 6MNZ PDBe: 6MNZ UniProt: V5V8R9

Downloads

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